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View Structure Prediction Details

Protein: exos-8
Organism: Caenorhabditis elegans
Length: 277 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exos-8.

Description E-value Query
Range
Subject
Range
PNP_CARHZ - Polyribonucleotide nucleotidyltransferase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 ...
221.0 [0..3] [277..305]

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Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEVLRGID PRGYFATFIK EGVYPDGRGL LDEQKLVFKQ GECGGVGSSV VSTQGVTVSC  60
   61 SIQASVSLVS DAPLVDIKIE GSQQLSEKDA EDCNSVLLSL FTNNCFVRRE NLRCLDVCGK 120
  121 PLPLEWQLHI IVKVLSLEGN FLDAAVCALG AALVDAKLPS IVLNHSEGDE STIEKTQIQA 180
  181 DYRTMHRLTL EEPLMCCSFG IFVDVNSDKK SEVLLLSPTL EAISVCRATC SVIVGKDDHM 240
  241 VMVRERGQFS SFSLLKKMCQ ITAERRHKFV ESLQNVV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.045757
Match: 2nn6C
Description: No description for 2nn6C was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.348396152404562 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle