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View Structure Prediction Details

Protein: vps-26
Organism: Caenorhabditis elegans
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vps-26.

Description E-value Query
Range
Subject
Range
gi|157755451 - gi|157755451|ref|XP_001670069.1| Hypothetical protein CBG21693 [Caenorhabditis briggsae AF16]
gi|187022422, gi... - gi|39586385|emb|CAE74042.1| Hypothetical protein CBG21693 [Caenorhabditis briggsae], gi|187022422|em...
419.0 [0..48] [408..1]

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Predicted Domain #1
Region A:
Residues: [1-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQERSIAIPS ENFNLIFFLT HAQSRFSLIL LLKLRYSFVF QSKILIQTNR KTMAMLFGFG  60
   61 QSAEIQIRLS NEDTRKIVKA RGDDGNMHDH FLYYDGESVT GTVHVNLKKA NHKFEHQGIR 120
  121 IEFIGQIEVY YDRGNQQDFI SLTRELARPG DLTQNAQFPF EFNNVEKPFE TYMGTNVKLR 180
  181 YFLRVTVIRR LTDLTKELDL VVHALSSYPD NDKSIKMEVG IEDCLHIEFE YNKNKYHLQD 240
  241 VIVGKIYFLL VRIKIKYMEI AILKTEVVGS GPNTFKESET VAKFEIMDGA PVRGESIPIR 300
  301 LFLAGYDLAP SMRDVGKKFS VKYFLNLVLV DEEDRRYFKQ QEVTLWRKAD KVMRRPGTED 360
  361 DEEEKQTTSI PGTQKFTAPA PVEHPKPESP RSDPKSGSTS PDDNSDSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 112.0
Match: 2fauA
Description: No description for 2fauA was found.

YRC Informatics Platform - Version 3.0
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