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View Structure Prediction Details

Protein: CE28005
Organism: Caenorhabditis elegans
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28005.

Description E-value Query
Range
Subject
Range
gi|91084329 - gi|91084329|ref|XP_972528.1| PREDICTED: similar to Serine/threonine-protein phosphatase alpha-1 isof...
364.0 [0..4] [359..8488]

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Predicted Domain #1
Region A:
Residues: [1-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDNITLDI HQFIKSHLFV KNWINYRQHV YEKSDLLLLI GQIMELFKME KTLATISPPV  60
   61 TIVGDIHGQY PDLVRILNSR ISKEEAKQKI VTSYSSNRFV FLGDYVDRGN HSIECICLVF 120
  121 ALKVLDLKFV SLLVIMFQIA YPTNFVLLRG NHETKAINFA YGFREELENR LGKKDGFEIW 180
  181 EKFNEVFSFM PLACLVGGRI LCMHGGISEK LESLDSIDSI VRPLPEVTDL AQDLLWSDPM 240
  241 DVQTLASISD TPKYAKNIVR GLAHSFNDAA VRDVCRRLNL HLVVRAHQMI PEGFKFNSDR 300
  301 KLLTIFSAPR YMNESDNRGA TLQVDVNGQL SISVMRYTKP LRTKALGSDE ITRGDHLPDI 360
  361 SRKKSNSFIP STFSSSKSTS LKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.522879
Match: 1s70A
Description: Complex between protein ser/thr phosphatase-1 (delta) and the myosin phosphatase targeting subunit 1 (MYPT1)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle