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View Structure Prediction Details

Protein: CE27661
Organism: Caenorhabditis elegans
Length: 413 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27661.

Description E-value Query
Range
Subject
Range
gi|114670980 - gi|114670980|ref|XP_001164327.1| PREDICTED: prolyl 4-hydroxylase, beta subunit isoform 5 [Pan troglo...
329.0 [0..20] [412..19]

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Predicted Domain #1
Region A:
Residues: [1-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLASVLLLL AACHLSVSVN GQEHKEAIEL SMANHDHVLG SAQVVFVAFC ADWCPFSRRL  60
   61 KPIFEESARV FHQENPQASA VWAIVDSQRQ ADIGDKYFVN KYPTMKVFVN GELITKEYRS 120
  121 TRSVEALTNF VKFQLSTAIN EFSSQDQLNQ EMDKSKRNVV AWLKKDGPEF ANLKKVASIL 180
  181 REDCSFWVPT DHFGTQTNDN KLSFFDPDSN EEAKFTGNFN DYDFVKQWVT DKCIPLVREV 240
  241 TFENVEELTE EGMPFLIYFR DPDNKTTDKV FGEAVARELY DQRSAINPLL ADGHKFAHPL 300
  301 KHLGKTKEDL PVLAIDSFQH MYLFPDMTQM NIPGKLREFV MDLHSGKLHK DFHENLDQRM 360
  361 IELAKAKAAR GITDDHEAQA PSTRPIDTTP PPSVFKELKP SDKRYSILQK SEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.69897
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle