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View Structure Prediction Details

Protein: acs-3
Organism: Caenorhabditis elegans
Length: 653 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-3.

Description E-value Query
Range
Subject
Range
gi|73979490 - gi|73979490|ref|XP_848838.1| PREDICTED: similar to acyl-CoA synthetase long-chain family member 1 is...
575.0 [0..12] [651..59]

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Predicted Domain #1
Region A:
Residues: [1-653]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQKKMLTHP ELFSRLVDGP ERIRESVQVP KPITGCPDGI TKTVWDVLTR SAQLNPNAPL  60
   61 FGESVNGRHV YTTYREAVEE ATIIGSGIVA IMQKNQSTNK LIGIAGIHSR KYMHTMHGIS 120
  121 GFDLTTVPLY HQSKLETLCD IIDNCKLEII FCENAKRAEG FLSSKLGDRL RSLKTLIILD 180
  181 KTTTLQKHDD VEVMSLDEFK EIGKRNKRNP VKPKPETTYV ICHTSGTTGR PKGVEMSHGS 240
  241 LVTSVSGIFT SWTIAYKWKF GLEDTYFSFL SLAHIYEHLI QTLTIYFGGK IGIYDGNTAT 300
  301 LIPQIQKLEP TIVSLVPRLL NKLYEAVHDG VAKKGFIARK LFDYAKKTKA RQLQRGVLRY 360
  361 DTFFDKIVFK KLKLMLGGKL KVLTSGGAPI TKEVKTFTRY AYGCPLVEGY GQTECSAAGT 420
  421 LTLPWDTTYG NVGGPAPWAQ VKLVDVPEKN YFSMNDEGEV CFRGNAMMTG YFQDPELTAK 480
  481 TIDSEGWLHT GDIGKWLPTG GLQIIDRKNE MFKLSQGDFV SPIQIEAIYA NSPLITQIYV 540
  541 TGKTERSFLV GIVVLDLPRF KQLPLVKALD GKESIEMIME NKEVKNAVIA ELNKYAKQNG 600
  601 LQTIELIRNV HLTLQEFTEE NGLITSTLKN RRKILEDYFA PQIAKMYKEV EAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 134.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle