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View Structure Prediction Details

Protein: CE27333
Organism: Caenorhabditis elegans
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27333.

Description E-value Query
Range
Subject
Range
lin-1 - status:Confirmed UniProt:Q965J5 protein_id:AAC17530.3
419.0 [0..38] [303..132]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNQKEFPSF NDLLHFEKNI FRISKNVQLQ NLLTKLNIFQ VIGKKFVYRF VTTDAHTPPT  60
   61 ADFSSNMNMK MCYVKDEKDI 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 2ewrA
Description: Crystal structure of hypothetical protein (tm1012) from Thermotoga maritima at 1.60 A resolution
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [81-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHEIPSFMTS LQAPPPPPPP QNPRGNTDFS ALSLLGTDSP TTHSVSTPSP TDSVCSPSSS  60
   61 VASSATPSTS SPVDESRQCR KRSLSSSTTP STTAPPQPPT KKGMKPNPLN LTATSNFSLQ 120
  121 PSISSPLLML QQHHQNSPLF QAQISQLYTY AALASAGLYG PQISPHLASQ SPFRSPLVTP 180
  181 KNLGLGELGS SGRTPGLGES QVFQFPPVSA FQATNPLLNT FSNSDKRLVA 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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