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View Structure Prediction Details

Protein: CE27294
Organism: Caenorhabditis elegans
Length: 285 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27294.

Description E-value Query
Range
Subject
Range
gi|157772879 - gi|157772879|ref|XP_001664504.1| hypothetical protein CBG00474 [Caenorhabditis briggsae AF16]
gi|39585258, gi|... - gi|39585258|emb|CAE57501.1| Hypothetical protein CBG00474 [Caenorhabditis briggsae], gi|187039155|em...
495.0 [0..11] [282..25]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRFSSQKSS RHSSRLHNLR GSHGNRKQRQ APPTLQPQQA GGAAGAPSVS FERGAGQMNP  60
   61 LTSGRRHSFE DFANLDSVIA EMLQNIKNMA QVLQNVGTDG PCTSTSSIEQ SVYL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSTFENIQPM MAALNEQVQQ GLELFRPPTC PTAELLRSTA EKLEEIGESS LSDKLNNNPD  60
   61 TLQNATWQTM NTVLRVFSLT DRQVMGYLRH LKSQTPSAMP IFPRHLDTCN TYIALGDHGA 120
  121 YFFGQDFVCR APMPNGTQQR RNVVDQPANA ETGSDVFWYE ASDTDDESAT D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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