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View Structure Prediction Details

Protein: sys-1
Organism: Caenorhabditis elegans
Length: 239 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sys-1.

Description E-value Query
Range
Subject
Range
sys-1 - status:Partially_confirmed UniProt:Q9XVI2 protein_id:CAB03402.1
376.0 [0..1] [195..1]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSTGEPQRG PAGPYHHPMP YHVDQIPTTS HPSWHQAPHP GLPTPPYHPQ QHPNYISMQP  60
   61 PPSQQQQMTP QALSTQQQQQ VQQQQQRQLY SSPSPSRGPA APAQNQKFRT EQWINNQAWP 120
  121 YSQSPAPPVA PSVMSYHQGD DRMSMLSVNT TMTNQFPDSQ RCYSSNGSTC ENVNPEMMQM 180
  181 NITQAAEQAI RFNFSYGLIH QIPCKDFIWQ KQYELGYDKI NLHKLIRQIC RTAYNKSLT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle