| Protein: | icp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 622 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for icp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
208.0 | [0..14] | [599..186] |
|
Region A: Residues: [1-324] |
1 11 21 31 41 51
| | | | | |
1 MPPKKRAVSR KPAEPTIKLF SSIPKISSIF DEVSEAHDDA AAKVFADLYK RMSSITEELA 60
61 TPQFSAEQLL NAVLKPGRID AEFVELISRQ KAKPAQPSSS SHRGDDDMET DEVETDQAGP 120
121 ITPRAGSVAT DGDFEEDILP VTLKRMQQMS ISKKKTEGSI SRNAAYSGTP RRNPPREAHN 180
181 QATPRNIFSS TPGRMAGTPG RAAVVPRTPH RVIPFNDAEK DPNARMKHAD ELRMKELEKK 240
241 REKARKDEEK RNAVMERRKE QERVRQEKLD QLKQKEERNA NLAKLHNSAK SPTRARLMQD 300
301 HAPNKAASRK IFPTAESTST PGRG
|
| Detection Method: |  |
| Confidence: | 14.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [325-622] |
1 11 21 31 41 51
| | | | | |
1 PAKKGKVEIL IGSDGQKTAP VAQPTVELSP SRELQRNGSR QVKMEPMSCD DSTPPARQHK 60
61 PKAKATKRSA HAASSSTSNV EAAAALAALQ EQQRIQLEQE QYLLQLAEDE RRKREQKEMK 120
121 EKAEKERQLR AREEQEHFLA VQREEQAQLE KQREREEAEL QATLARCAEK QARQEALRKT 180
181 PPPAAYEMTP PRTYQNNSKN DYGLNDLNSD DETDQEDDPR KDVPAWAEFA VVRENVRRHA 240
241 INPPFDVAQF FGSIGKPNLK EIFSDAVKVK KRGSSAVWKK SPSTLNTSSR TILQDISE
|
| Detection Method: | |
| Confidence: | 5.045757 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
