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View Structure Prediction Details

Protein: gop-3
Organism: Caenorhabditis elegans
Length: 434 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gop-3.

Description E-value Query
Range
Subject
Range
gi|74056306, gi|... - gi|74316811|ref|YP_314551.1| surface antigen (D15) [Thiobacillus denitrificans ATCC 25259], gi|74056...
305.0 [0..3] [433..334]

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Predicted Domain #1
Region A:
Residues: [1-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKTFHKAQ TIRAKASGVP SIVEAVQFHG VRITKNDALV KEVSELYRSK NLDELVHNSH  60
   61 LAARHLQEVG LMDNAVALID TSPSSNEGYV VNFLVREPKS FTAGVKAGVS TNGDADVSLN 120
  121 AGKQSVGGRG EAINTQYTYT VKGDHCFNIS AIKPFLGWQK YSNVSATLYR SLAHMPWNQS 180
  181 DVDENAAVLA YNGQLWNQKL LHQVKLNAIW RTLRATRDAA FSVREQAGHT LKFSLENAVA 240
  241 VDTRDRPILA SRGILARFAQ EYAGVFGDAS FVKNTLDLQA AAPLPLGFIL AASFQAKHLK 300
  301 GLGDREVHIL DRCYLGGQQD VRGFGLNTIG VKADNSCLGG GASLAGVVHL YRPLIPPNML 360
  361 FAHAFLASGS VASVHSKNLV QQLQDTQRVS AGFGLAFVFK SIFRLELNYT YPLKYVLGDS 420
  421 LLGGFHIGAG VNFL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2qdzA
Description: No description for 2qdzA was found.

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