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View Structure Prediction Details

Protein: CE26290
Organism: Caenorhabditis elegans
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26290.

Description E-value Query
Range
Subject
Range
gi|54645234, gi|... - gi|54645234|gb|EAL33974.1| GA19146-PA [Drosophila pseudoobscura], gi|125986289|ref|XP_001356908.1| G...
199.0 [0..1] [228..14]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVIYNSSSM VQVISYKDFQ NSDQSDEEND DSIIHVVKIV RKEPFAELKL TGTVEVKKSV  60
   61 IFGFEHIIII GLLLDSVILI RSFRFGNDYP NHMWR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSDSIQRWVY NFLPTEVVSL GNDFHTTVLD SSEPWIVDFF APWCGHCIQF APIYDRIAKE  60
   61 LAGKVNFAKI DCDQWPGVCQ GAQVRAYPTI RLYTGKTGWS RQGDQGIGIG TQHKEQFIQI 120
  121 VRQQLKLDEH DEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.154902
Match: 2i1uA
Description: No description for 2i1uA was found.

YRC Informatics Platform - Version 3.0
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