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View Structure Prediction Details

Protein: CE26225
Organism: Caenorhabditis elegans
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26225.

Description E-value Query
Range
Subject
Range
gi|57042739 - gi|57042739|ref|XP_535226.1| PREDICTED: similar to smooth muscle cell associated protein 5 [Canis fa...
218.0 [0..2] [254..10]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYPGTGVKQ PEVSIDLNGF YSSNFEQFEH PDQSSNAPNS GSISSPTGQI SAQAYRRTNA  60
   61 GAAGKFMENS GFGWLLEVNE EDSDQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPLLEELDID LTDIYYKIRC VLLPLPYFRM KLNIVRESPD FWGPLAVVLA FAILSLYGQF  60
   61 GVVSWIITIW FCGGFMVYFI ARALGGDVGY SQVLGIVGYC LIPLVVTSLI TPLFSSFRLL 120
  121 SNGLGMFGTI WSVYSAGTLL CVDELQAKKP LVVYPVFLLY IYFYSLYSGV 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 39.677781
Match: PF04893.8
Description: No description for PF04893.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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