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View Structure Prediction Details

Protein: CE26095
Organism: Caenorhabditis elegans
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26095.

Description E-value Query
Range
Subject
Range
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
172.0 [0..1] [348..185]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQHRRIPKK NRKKLKSVDP FNNKANAARF KDKNKNSNQA PVSLKDEQPL TKAAKNLMGS  60
   61 GITTKEEVKK KKKQKNAVLA QAEELGMKKG KFETVNRFVK RIEGTLHSRI NEQIAIAKHG 120
  121 LAGRKQEEID ADYKIIEDAE KRKKEQEKRE IENKIKEARK KREQEARRLE EVEKLKEQKK 180
  181 AEKRKMKEAL EKEEEEESFD EDEVSEKRAK IEKSTEKGGS EKATTKLSKK DRRKETLKAR 240
  241 KSDEQKRRAG EALINSREII EFGERNDAPP TFGGALKKKF EPLMAKAGQK TTLLLHSMLQ 300
  301 KGGGQKTEYL NNSTKIQEER QKVIDAYRDM KKQKRIAAAF AAAASSSSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle