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View Structure Prediction Details

Protein: CE26028
Organism: Caenorhabditis elegans
Length: 584 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26028.

Description E-value Query
Range
Subject
Range
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
187.0 [0..2] [533..197]

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Predicted Domain #1
Region A:
Residues: [1-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAESATTET VEKSGNEEST VEVKVNGEAQ NPPQESAKPA ESVEDDDEPA PAKKRSGGDS  60
   61 EEKEDEAAED GPEDGEEKSN LDDDQNVENP AYIPKTGRFY MHDDNRRGDV NNSQVQDDDS 120
  121 DDRRNLKKSR ADCDWKHDRF DEKFQRPKTK KQIVTKYGFD IRHKDGTPIQ DGEEIDAPAP 180
  181 ESTEEESSDA RQVSRQQKDR RVSSTTRGKV GKSGTSRRPM KQREREDTVD ESKGEEEEDQ 240
  241 GVRPAQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.39794
Match: 2j0qI
Description: No description for 2j0qI was found.

Predicted Domain #2
Region A:
Residues: [247-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRQVKQQEKP RKQKPAAPPS SEENEEDEDD GAIRRGQRRA VPLRRGTTSG PPSRLRGRMS  60
   61 HPMGPPRRSS GAPPSSASNR RPVE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [331-584]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSRGPPPPP SSSSRRDYSH QGDRNDDRFE NHRRGVIRGA SRGGGTVTRG TGGYGRTGAI  60
   61 RGGVRGSGAP RYGVRRTDTS EQSEGYQRGG SGTDYSSPRP NHQSDRSYQA SSTNFRGGSH 120
  121 PHPSANVYPS SRGGYSSNNA DYASRGGGGY HGPPQHHNNH HNHQQKRFVQ GPPPPMVAVG 180
  181 VVPGNVVPPP QMTRGSTHGG NQHNGGGGGG SGGQQRIRQP TDVVYFDPQQ QQGTRQLPPR 240
  241 SKKVIPIVDP KDHQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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