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View Structure Prediction Details

Protein: dpy-10
Organism: Caenorhabditis elegans
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpy-10.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
320.0 [0..33] [334..1426]

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Predicted Domain #1
Region A:
Residues: [1-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYRCVTGLQ IGFSLFSFII VCVALPIMYN HVQNTITYVD REMAYCERSN DEAALELQYG  60
   61 KMRMTGNRTA RGAYGSGASH GFRPTAYGDE ITGAPLETEC PGCCIPGPPG PRGSSGTPGK 120
  121 PGLPGNAGKP GMPGTTPNQT CPLNQVREPP PCRPCPKGPP GIKGWPGFPG DVGPPGPPGL 180
  181 KGIDGEDGAP GETGPTGPPG YRGGPGAPGD KGPTPEGDLK EGPPGDEGPP GPIGAPGMPG 240
  241 LPGRNGLTGG QGERGWPGVS GESGEPGYPG PEGPMGGQGP PGEPGVCVCQ NVDSILLINP 300
  301 GPQPRIRADD YNSDDGYGGS RGGGDRAGYQ GYGRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.69897
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle