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View Structure Prediction Details

Protein: CE25820
Organism: Caenorhabditis elegans
Length: 213 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25820.

Description E-value Query
Range
Subject
Range
gi|6760457 - gi|6760457|gb|AAF28360.1|AF223951_1 TIM22 preprotein translocase [Rattus norvegicus]
190.0 [0..20] [212..1]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALASSNATS MEELFGNPFR PKKERVVVEE KPFEYTPSAY VQMIDQMIGI KTRPWNPERT  60
   61 PIKPIQMLTL PEMSREERWI QWGMENCTVK ASISGVLGVG VGFAFGLFTA SVDPQLSMVG 120
  121 GDPTKQLTLK QTWKEMSSRM KSYGKNFGSI GLMFSGTECA LETIRAKSDW RNGTYSGGIV 180
  181 GGLLGLRAGI MPAVWGAAGF AVFSTIIDHY MRG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 44.60206
Match: PF02466.10
Description: No description for PF02466.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle