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View Structure Prediction Details

Protein: immp-2
Organism: Caenorhabditis elegans
Length: 152 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for immp-2.

Description E-value Query
Range
Subject
Range
gi|91709345, gi|... - gi|91775358|ref|YP_545114.1| signal peptidase I [Methylobacillus flagellatus KT], gi|91775214|ref|YP...
159.0 [0..3] [151..38]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIFRTLVKG TVGTCVVFTF FDVVGHPAQV VGNSMQPTLQ GGDARWYKRD IVWLSTWNLY  60
   61 KCSPGTILTF VSPRDPDAVH IKRVTAVENA IVRPEKRPEL ITDIPKGHYW MEGDNPEHRH 120
  121 DSNVYGPVST SLVKGRATHI IWPPNRWQRL SK

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Detection Method: PSI-BLAST
Confidence: 24.045757
Match: 1t7dA
Description: Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle