YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE25314
Organism: Caenorhabditis elegans
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25314.

Description E-value Query
Range
Subject
Range
gi|41054229, gi|... - gi|41054229|ref|NP_956091.1| N-myc downstream regulated family member 3b [Danio rerio], gi|28278619|...
222.0 [0..1] [341..2]

Back

Predicted Domain #1
Region A:
Residues: [1-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIEMHSFT RDMQPLMEES ANNFTEEKVN TAFGAIKVSI YGDRNDPKKV PMVTFHDLGL  60
   61 DSESNFQNFF QFVSIAEFAD KFCIYNVNAP GQEMDAQPLP ENFTYPTMDG IAKTIESVAD 120
  121 HFKLNQFIGF GVGVGANVLL RYAAQNQNRV IALVLVNCCS GKSGWVEWGY EKWNTSYLRK 180
  181 VGMTKFTVDY LMWHHFGRNY DRCSPDIVRQ YRVFFQHLPN PNSLAEFIES YIQRTPLPIS 240
  241 RDGTTGVQLK VPVLQLVGAG SAHVEDTVEV NTKLDPAHAD WIKISDSCGL VLDDRPDAVT 300
  301 ESMMLFLQGL GYFPTLNVMK MTKKMQETQN GGFAAVASSA NEC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.39794
Match: 2qmqA
Description: No description for 2qmqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle