YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE25187
Organism: Caenorhabditis elegans
Length: 227 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25187.

Description E-value Query
Range
Subject
Range
CE33941 - status:Partially_confirmed UniProt:Q9N493 protein_id:AAF60407.2
236.0 [0..1] [227..255]

Back

Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIRILSSS ILPRCYPLVL SVIFGICHQT MLKSTGLQAW ILDESANRRE NLITANAEGL  60
   61 TSLMGYLTIF YASLAIGEFM AKTSIRIKSW IRRCFQLFAL SLILFFIQIA AEKCVDPPCR 120
  121 RVVNATYIFS QLTLMTFATG VCLSIQMFNT VAWCSSFPQF SNGEDPYSVV SPCLSDSINR 180
  181 HSLLFFLVSN VLTGLVNSRL MLIASLRTLP SPFSWHMSLC APVSCTF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 80.30103
Match: PF06423.3
Description: No description for PF06423.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle