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View Structure Prediction Details

Protein: egl-20
Organism: Caenorhabditis elegans
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-20.

Description E-value Query
Range
Subject
Range
gi|48138880, gi|... - ref|XP_396946.1| similar to wingless [Apis mellifera], gi|110749798|ref|XP_396946.3| PREDICTED: simi...
441.0 [0..29] [392..41]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFFICLIFL FVLLVYGQYS PPSATYSTQQ VPYNWLTLAF VGSNDYLPRP HYHSTDREHF  60
   61 KELCRRLDGL NPNQQALCAE NPFSIPFVAR GVREAIRECE NKFKFERWNC SSRDEVTETR 120
  121 HGKFQDILGK TLRS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANKEAAFLNA IMAASIVHSI TKGCNTGNLT ECGCDSKPGM QRYQAESDPS MSRDQFSWGG  60
   61 CSDNVPHGIR YAKKFLDDWE TAQFDKTKNV AHLVRRH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNFVGREAIA QNIRRQCRCH GVSGSCEFKT CWLQMQKFSQ VSDLLKKRYD HFAVQVTRKA  60
   61 TKRLRRKERT ERKIPLRGNE MAYVHRSPSY CEKNLTAGIL GTSGRECIHN SYSSESCDLL 120
  121 CCGRGYNTRL EIRQTQCECK FVWCCEVKCK TCTEEVAVHT CK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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