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View Structure Prediction Details

Protein: byn-1
Organism: Caenorhabditis elegans
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for byn-1.

Description E-value Query
Range
Subject
Range
gi|109071144 - gi|109071144|ref|XP_001085599.1| PREDICTED: similar to bystin [Macaca mulatta]
654.0 [0..1] [440..1]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKRNLKGRG DKLSANAPLD NQLEAGKVAK QRDELREKQK RKREDSQTDE FVPDSLSSKI  60
   61 LNEARKQLLE EALERQETES ATSSVPKRQR GAWLGADASG DKSDDDDDDN EEEDDNGFED 120
  121 QVVELDPRDE ADLARFLKKD A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [142-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IQMSTLYDII QAKIEAKQND AELALSQVDP NEFNMRDMDP EVVEMYEQIG QYMSKYRSGK  60
   61 VPKAFKIIPK MINWEQILFL TKPETWTAAA MYQATRLFAS NMNPKMCQRF YTLVLLPRLR 120
  121 DDIDEFKKLN YHLYQALCKA IYKPAAFFKG LILPLLESGT CTLREAVIFS SVLTKVPIPI 180
  181 FHSAAAMLRI AEMEYTGANS VFLRALIDKK YALPYRAVDG VVNHFIRLKT DERDMPVLWH 240
  241 QCLLALCQRY KNDLNAEQKA AIYELIRFHG HYLISPEIRR ELESKETEDG HVITSVVVEG 300
  301 RKTDSMEF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.19
Match: 2ilrA
Description: No description for 2ilrA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle