| Protein: | nhr-23 |
| Organism: | Caenorhabditis elegans |
| Length: | 588 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-23.
| Description | E-value | Query Range |
Subject Range |
|
|
285.0 | [0..1] | [588..1] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MACKVTGPNR HLTSVLEMSS FVYWPRSRQQ AHNFPMQAVE QKLADATRTL HAKSSLQPSL 60
61 SIETPKSKEN DESGCESSNC MFHPHTIKSE PNFCFAREFK SVPDDFRIGG GDLQMGNNSK 120
121 RLTCVIDTNR VDMAGILPDN MSFRGLPENK SLLVSA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [157-258] |
1 11 21 31 41 51
| | | | | |
1 QIEVIPCKVC GDKSSGVHYG VITCEGCKGF FRRSQSSIVN YQCPRQKNCV VDRVNRNRCQ 60
61 YCRLKKCIEL GMSRDAVKFG RMSKKQREKV EDEVRMHKEL AA
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 2a66A |
| Description: | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [259-588] |
1 11 21 31 41 51
| | | | | |
1 NGLGYQAIYG DYSPPPSHPS YCFDQSMYGH YPSGTSTPVN GYSIAVAATP TTPMPQNMYG 60
61 ATPSSTNGTQ YVAHQATGGS FPSPQVPEED VATRVIRAFN QQHSSYTTQH GVCNVDPDCI 120
121 PHLSRAGGWE LFARELNPLI QAIIEFAKSI DGFMNLPQET QIQLLKGSVF ELSLVFAAMY 180
181 YNVDAQAVCG ERYSVPFACL IAEDDAEMQL IVEVNNTLQE IVHLQPHQSE LALLAAGLIL 240
241 EQVSSSHGIG ILDTATIATA ETLKNALYQS VMPRIGCMED TIHRIQDVET RIRQTARLHQ 300
301 EALQNFRMSD PTSSEKLPAL YKELFTADRP
|
| Detection Method: | |
| Confidence: | 39.221849 |
| Match: | 1z5xE |
| Description: | hemipteran ecdysone receptor ligand-binding domain complexed with ponasterone A |
Matching Structure (courtesy of the PDB): |
|
