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View Structure Prediction Details

Protein: CE24746
Organism: Caenorhabditis elegans
Length: 745 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24746.

Description E-value Query
Range
Subject
Range
gi|83745880, gi|... - gi|83745880|ref|ZP_00942937.1| TRANSCRIPTION ACCESSORY PROTEIN (S1 RNA binding domain) [Ralstonia so...
674.0 [0..5] [743..473]

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Predicted Domain #1
Region A:
Residues: [1-745]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRQRLVDKE WILQFPIEYF IHKEVHELNS TQAQRLVSLF KNGCETAYIA RYRGDVHGYL  60
   61 APEKIRKAME AYVDAKNLNN KVSSAISTVT AKVAGAQEKI IVTERFKRCE EFDEVTDISK 120
  121 EYSTGTRKTK ANIARALGLE PPAQSILDGN FVDFKSLLSN GLKTVKDVEE HLKICLADLI 180
  181 NRDEEVRKVS ANIDILKKEC RVSAKLSREA EKNRKDLEKR GIIEKYKNFI GEKWNAEDIR 240
  241 DHTVSALNKG FDEGIITWKI ECEFNDAKYI HPFSRKSVYF GMKNFYQEAL AYSIKNYFIP 300
  301 RIERKMANHL KDKAKDRSIV LFGENVDQLL SQEGIRDKFV IALDPGRSKI KTAFLKPTGE 360
  361 VVDMSSFSIY GTRFDGGGVD LLKKWSQQTE RKDIVFAIGN GTNTYNTQIA VSDMINSNVF 420
  421 PKEINVSYCI VPEHGASKYS CTPSAIEEFG ENAEITEISA VSIGRRLIDP MSEYVKIEPQ 480
  481 HLGKGQYQLS VDPKKLNESL LNVVRDRVSF NGVDLNTASK NLLQRINGLN EKTAKEIVQY 540
  541 REQNGRFRSR AELKEVKGIG ALTFQQCAGF LTVSRPDDAE DGPPKKKFKK SSTSKEWNPF 600
  601 DETIVHPDDY RTGESLLGKL NVSIEDITGR IKSFSISRLT AEEAKVLNLL QNLTLKTKMK 660
  661 PPPPLRTKVG QIRDLAEGQR FTGTVSNKTD FGVFIDIGVG QDGLAHISHF KDGHYSLMLP 720
  721 SVNDSVEVVI DKIREDGKIS LSPVY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2oceA
Description: No description for 2oceA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle