YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE24450
Organism: Caenorhabditis elegans
Length: 507 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24450.

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
286.0 [0..1] [459..80]

Back

Predicted Domain #1
Region A:
Residues: [1-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEEQPEVIE AIENNRFEIV IKNVRIDSVT EAANLSQKRV FESMSQLNLL SLTGCSLHNL  60
   61 SSSIRSCSNL MHLVLPKNDL KQLPDVFDCL PKLKFMDLSH NHLDALPASI SKCENLESLI 120
  121 LNNNRLNESS FPDISNLSNL HIFDAAHNTI SKIPASLTSH NLSAKLHTII LSHNSIEVIP 180
  181 DSLSNLKQLK ELKIDENKLK DVPSVIAHLP KLKVLDISKN CFSESRFQKL ANDKRGKLNA 240
  241 VIALAQKIGK PIGNSEEQKK APESGSPDFP VPDAPLTVRT GIENLTVRRH PSVSEIRPYL 300
  301 VCCVINNVDL NGGDSFKKFI ALQTKMHASA LCENRTLSAI GTHRLDSFQL PLCYMALPKD 360
  361 ELYIRALNKK SSVSASELLD SLLRDAELAR KRSKRSTVDP LHKYLHIVKD ENILACLVDS 420
  421 QQIVISLPPI TNSDCTKLTV DTTSIWVEVS SKQSLEACKK TMDELILSSR QIFPTLSIDQ 480
  481 VRVVDSDTLV SIYPDKNDLP GVSRISN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.522879
Match: 2z63A
Description: No description for 2z63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle