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View Structure Prediction Details

Protein: CE24362
Organism: Caenorhabditis elegans
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24362.

Description E-value Query
Range
Subject
Range
gi|39598268, gi|... - gi|39598268|emb|CAE68960.1| Hypothetical protein CBG14940 [Caenorhabditis briggsae], gi|187027574|em...
gi|157745499 - gi|157745499|ref|XP_001667846.1| Hypothetical protein CBG14940 [Caenorhabditis briggsae AF16]
386.0 [0..1] [301..1]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDGQLVQRR RKAEEPVTEK VDEASGDSAQ SSDQEDNDKG TRLTLMEQIL LLGLKDREGY  60
   61 TSFWNDCISS GLRGCVLIEL VLRGRIQLEG GGMRRKNLLN RKVTVKSSEP TGDVILDEAL 120
  121 RHMKET

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [127-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPPETVTSWI EYLSGETWNP LKLRYQLRNV RERLAKNLVE KGVLTTDKQN FLLFEITTHP  60
   61 LSDGNQKTKL IKEVQEAVLG KWTNDVHRMD KKMLSLIVLA HASDVLENAF APLSDQDYEV 120
  121 KQMLEILFFS GKLAHFEPKN VAMKRVRSLL DLDYDQQAEK KGNDVMWAVF EAFSK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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