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View Structure Prediction Details

Protein: taf-7.2
Organism: Caenorhabditis elegans
Length: 236 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for taf-7.2.

Description E-value Query
Range
Subject
Range
gi|50745656 - gi|50745656|ref|XP_420187.1| PREDICTED: similar to transcription factor IID [Gallus gallus]
264.0 [0..24] [236..1]

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Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIYPGVRPP MKRGPKPQSF FDDTPVASSD DPPDFESHIV LRVPEDCVGR IEKIIQSDGK  60
   61 HEEFSLNLNS DARNSTVRIG NQLLNGKILD LPTITEIHKT LDNKSLYKVA DVSQILVCTH 120
  121 DSINSIASSS EDAAQKAAAA KAKQWQYPHG LTPPMKSARK KRFRKTKKKK FMDAPEVEKE 180
  181 LKRLLRADLE ADSVKWEIVE GNKEGATDEV RTQRHVTYPS SSEDESDVGD DDDKDD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 100.136677
Match: PF04658.4
Description: No description for PF04658.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle