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View Structure Prediction Details

Protein: CE24031
Organism: Caenorhabditis elegans
Length: 467 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24031.

Description E-value Query
Range
Subject
Range
gi|39592454, gi|... - gi|39592454|emb|CAE63531.1| Hypothetical protein CBG08011 [Caenorhabditis briggsae], gi|187033040|em...
712.0 [0..1] [467..1]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKTKWRLNQ SIILFFIAQF SVSAAVKCFD CVGMDCMGSF CEGEYCMISQ YAPRWGTARW  60
   61 GEPEIVKGCA KGSMLGKDVR SHCEYAEDTD EPFTCFCNGK DLCNSRKSSR KLEREDVELI 120
  121 QCVCSGAHCK NDKTCVGELC TFVENHVTEQ VEQGCTNASV PLIERRAIGS CMAPPITGAM 180
  181 HHTVAKDAHS LLGVESCICG TDYCNSEKPK PT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.79588
Match: PF01064.14
Description: No description for PF01064.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [213-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APENEKCTAY VEVTTMGTTT RSKNISCTGE YCYTASIKSK LGIMSSYRTL GCASFTGEDP  60
   61 LPEELDPTGC ATFTSENLEV KTCFKTKDKA AVGRALASKQ IPESRQSKPS KGNKQKSQKS 120
  121 KSKPVMEVEY DNEEDEEESE EKEEKVKGKS NQKTVKERIR AEEARKTVEK EEEEAEEEAV 180
  181 EEEKEEKAAA AVESSSKKSF IFQKPTQPPI PDDSNTTMIT VFVLIILCIL GSGIVWKFEL 240
  241 HKKLKRSNYD SVAGG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 1sa1E
Description: TUBULIN-PODOPHYLLOTOXIN: STATHMIN-LIKE DOMAIN COMPLEX
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle