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View Structure Prediction Details

Protein: CE23981
Organism: Caenorhabditis elegans
Length: 500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23981.

Description E-value Query
Range
Subject
Range
gi|54311245, gi|... - gi|54311245|gb|AAH84823.1| LOC495359 protein [Xenopus laevis], gi|148227146|ref|NP_001088491.1| hypo...
706.0 [0..1] [500..1]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSCLETIRN LHEERERLID ITVKEKIAEK LTHKAKVNSE QRVKTFVDRY YSVSAELAKF  60
   61 YKDEDGSKSM EMDSVSGPNE FAEFYSRLKV IKDAHRRNPD ELAEPLTVEF QKINEEIINP 120
  121 ERAEPDMVEF SDEEAYGRFL DLHAQYDKFI NLKNIKRVDY MTYLLNFEKF TEIPKNTTKK 180
  181 TGAYKEYINS LKDYLVSFMQ RTRP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [205-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHDLDSVFSE VNQTVERAFK AGNLPGWEAD KNKNGPQAAA VDLSPYNSAE ELEGLGLERL  60
   61 KGALMAIGLK CGGTLKERAD RLFATKGHKL SDLEKAAMSS N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [306-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSDAEKQNAK NLTLAQTEAH IMALADILAE ERTGTRENVE RKQARSAGEV EEEEEEEIVI  60
   61 EEEEEIDESA PYNPKNLPLG WDGKPIPYWL YKLHGLNLSY SCEICG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [412-500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQTYKGPKAF QKHFNEWRHS HGMRCLGIPN TSHFANITKI KDALDLWNKL KTEKEMAKWN  60
   61 PDIDEEYEDS SGNVVTRKMY EDLKRQGLL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1zr9A
Description: Solution Structure of a Human C2H2-type Zinc Finger Protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle