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View Structure Prediction Details

Protein: acs-18
Organism: Caenorhabditis elegans
Length: 700 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-18.

Description E-value Query
Range
Subject
Range
gi|50604627 - gi|50604627|gb|AAT79534.1| acyl coenzyme A synthetase long-chain 1 [Sus scrofa]
603.0 [0..2] [689..4]

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Predicted Domain #1
Region A:
Residues: [1-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYRGLNLIT RQVISRLTFR YSGLFTRITY PISVQDRGFF FGKRRVPRCD LKNQSIIQED  60
   61 GGRKAAWLGD GPLQHGWFEG VLTTYSGIRR GPTVGGKEML GKRVMKDGKL EWEWISYDQA 120
  121 FETSDHASQA IRKLGIEIGE ESKIGIYSNN RPEWILSEMA IHNFSNVSVP LYDTITNDDM 180
  181 HYITNLCEIS LMFVDAEIKT KQLIRDKSYL SSLKYIVQFN ECSDDIKEMA RENDFRLWSF 240
  241 NEFVEMGKKQ KHRPHVPPTP ETLATISFTS GTTGRPKGVM LTHLNMCSAT MSCEEFENEA 300
  301 GVQDAYLSYL PLAHIYERLC LLSNFMIGSR IGFSRGDPKL LVDDVQALAP RSFATVPRVI 360
  361 DKIHKAVMKQ VQDKPLKKMI LNAAIAYKLY HYKMTGKATR KTWVDKYVLH KIQMLLGPNI 420
  421 RQLILGAAKS DVSAMRFARG AFGVEVLEGY GQTETSGPTT LQLVGDTRIG CVGPPMACAM 480
  481 IKLIDVPELG YSVDKNGGEV LVKGHNVTSG YYKNPEATAS SFTEDGYMKT GDIGRFTAEG 540
  541 SLQIIDRRKN VFKMPQGKFV APDLTESLYT SSSFVQQIYV HGDMEKPWLV AIVVPDPEYL 600
  601 ASYALTKHNI NGKTYEQLCN IPILADDVLR QFVELTEEDK RPRYEGVYGV HLTPVAFSAE 660
  661 NGLTTPTLKN KRNAIAQFFK AEIDGMYKKI ETSELSNLAK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 132.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle