Protein: | ldb-1 |
Organism: | Caenorhabditis elegans |
Length: | 629 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ldb-1.
Description | E-value | Query Range |
Subject Range |
|
405.0 | [0..68] | [443..5] |
Region A: Residues: [1-76] |
1 11 21 31 41 51 | | | | | | 1 MCVVIFLKFL FSDNGNNQHG TEAAFGRLAQ SYRIQDLLFI IVIFFRAIHI MMFHRPPSAR 60 61 PPLNHVDQLK SLQATA |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [77-263] |
1 11 21 31 41 51 | | | | | | 1 LGKPGMRSQA TEPQPIGNTV SPLEFRIHDM NRRLYIFSST GVSENDQQQW WDAFSHEFFD 60 61 DDCKLWFVIG SEPVAFASRE RYIINRQFIP KFFRSIFDSG MRELQYVLRG PSRECTLANG 120 121 SQAYENENVL QITRYDQSSQ FEVNTEGKLY VEFAPFDEVM NYRIKAWTLE LKRSNEFVYN 180 181 QNTADYR |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [264-629] |
1 11 21 31 41 51 | | | | | | 1 VEAQNPEQEN KPRMGFFKST FNLMTMLKIL DPMQSIMSSA KSAPAITPRE VMKRTLFQHH 60 61 QVRQQNMRQQ QLNQQMMIPA PEPEKPKPAR KRQRKPAANP RGSKKATAAA AAAAAAATNG 120 121 VPPTVPTASP ANNQQFPPNP MTSQFQQMSY PDVMVVGEPS MMGSEFGEND ERTISRVENS 180 181 QYDPNAMQMQ SLGQGPNSSM NINGRNMMNQ HHPGMQPPPG QQHMPPHSMG SQMPTSMHNP 240 241 MHMPPGSMQG HGGMPPMPST MANQMPPPNL PPHTMSNQMP NSRMPPMQGQ MPPSGMPGQM 300 301 SNPNMMGSGM PPMSMSSQMP GSMSNPMPNQ MPGGMQMNQM PPPNYSQYTG GPPPQWPPPN 360 361 SAMITG |
Detection Method: | |
Confidence: | 5.39794 |
Match: | 1y0fA |
Description: | No description for 1y0fA was found. |