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View Structure Prediction Details

Protein: png-1
Organism: Caenorhabditis elegans
Length: 606 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for png-1.

Description E-value Query
Range
Subject
Range
NGLY1_CAEBR - Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis briggsae GN=png-1 PE=3...
607.0 [0..1] [605..1]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVTEVGSLP ELNNILERSD ANRLIIIDFF ANWCGPCRMI SPIFEQFSAE YGNATFLKVN  60
   61 CDVARDIVQR YNISAMPTFI FLKNRQQVDM VRGANQQAIA EKIRQHYSPT PANPNAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.39794
Match: 2o7kA
Description: No description for 2o7kA was found.

Predicted Domain #2
Region A:
Residues: [118-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDSEKRFLEQ FVKCSNVPRS YQDEVFKALA RSVMPEELVG RAMTEGPRDE KAILKDLLHW  60
   61 FKTQFFTWFD RPTCPKCTLK CSTDGLQGTP TREEQKEGGA SRVEVYICDG CNTEMRFPRY 120
  121 NNPAKLLQTR TGRCGEWANC FGLLLAALNL ESRFIYDTTD HVWNEVYLLA EQRWCHVDPC 180
  181 ENTMDRPLLY TRGWGKTLGY CIGYGSDHVV DVTWRYIWDS KKLVTQRNEV RQPVFENFLS 240
  241 KLNSRQAEGQ TEPRKRELAV RRVCELMEMM AQEAKNHKIG WEKIGDDLGG RI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.69897
Match: 2f4mA
Description: The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [410-606]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGSEEWRRER GELGESGPKL LAEPIKLAPP TGPAQNYLEF NYDVITDTYS QPPEIGFSAQ  60
   61 AFELENVQRV EETDWNMTYL CRKRGDAPGN ISWHFDLKSL KKSIEKIEIR MAGIQKFEKG 120
  121 KAMAIACLGD SCMRLPIDCS ALTIEDPKNA EILKITATLS GGEGAIGFQQ AQIFRTELKR 180
  181 GGGARTESFS VKIWMKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.09691
Match: 2g9gA
Description: No description for 2g9gA was found.

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