| Protein: | mat-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 788 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mat-1.
| Description | E-value | Query Range |
Subject Range |
|
|
412.0 | [0..1] | [787..780] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MKESAASVAV RPQLREVFER FPADAHRTIE DEIHEMMKCY AFDDAIFLAE LHYETDKSNN 60
61 SESLLLYADC LYRANKKEEC YGLLSSVKLS GARLFYLLAR VSYDLNKIDD CRGALFEHDD 120
121 GVIRKDILEE PRVASHANLL HAQMLCDESY MDLALESCQK SLDENILLWS AIITYLRFGG 180
181 HDLAHTFEKH HRKSNGLYLD SPA
|
| Detection Method: |  |
| Confidence: | 3.45 |
| Match: | 1a17A |
| Description: | TETRATRICOPEPTIDE REPEATS OF PROTEIN PHOSPHATASE 5 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [204-383] |
1 11 21 31 41 51
| | | | | |
1 SSLKSETPSP NVPGPSSSSA ASTAEPSRLE SSVRRSTRGT IASANRETRN TTSNITPRQS 60
61 TPGSTPSRIN PTAPRKSSRI SEMTTRRTES SVTGSRSSLF TEPERPHTRA THSSRNRANA 120
121 ALNSDTENSN ASNTRTRSGI ASVTRGSSSS QRTNPVRTSI RIADAAAAAN KTAKTLSQRR 180
181
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [384-788] |
1 11 21 31 41 51
| | | | | |
1 RNEKQPLVSR NSNLARSLSG STNSVASTAS ERPSEDEVSQ INPPLPSVAS SLNNDEPMDI 60
61 VDGVYDPEYK KLFDVYQHIA LIEESISTYN WRSADALFAK LDRDIILNTS MVRLQLGRAC 120
121 FEQSEYRECR NILDDLHKRR KWKVDGTELL STSMWHLQDT HALSALSQIL TTESRERPQS 180
181 WCAAGNCFSL QRQHTQAIEC MERAIQLDKR FAYAYTLLGH ELIVQDELDK AAGSFRSALL 240
241 LSPRDYRAWY GLGLVHLKKE QNLTALTNIQ KAVNINPTNR AMLCTLSQIE QQRGQIDTAL 300
301 VLIDRALTLN PLDVACRFNR SRLLFEANRN EECLVELDKL KASSPDEAFI FHLLARVHRR 360
361 MGNTHLALLN YSWAAELDPR GEQNITDSNV INREEYEDDE YGSPV
|
| Detection Method: | |
| Confidence: | 69.221849 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
