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View Structure Prediction Details

Protein: dlc-6
Organism: Caenorhabditis elegans
Length: 129 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dlc-6.

Description E-value Query
Range
Subject
Range
gi|187022679, gi... - gi|39580087|emb|CAE73791.1| Hypothetical protein CBG21341 [Caenorhabditis briggsae], gi|187022679|em...
gi|157746897 - gi|157746897|ref|XP_001668544.1| Hypothetical protein CBG21341 [Caenorhabditis briggsae AF16]
219.0 [0..21] [129..19]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSNPSSSP DVSSQTSATQ EEPKVKPRHL ESRIMYTDYD TQWQKKITKW ARVAVQMVFE  60
   61 KVVETENEFY QEVAASFKES LKSSSGDEKP KKWHVIVGND FSVQADALKG TISFFAIGDV 120
  121 KFLIYTSPN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.41
Match: 1yo3A
Description: 1.65 Angstrom Structure of the Dynein Light Chain 1 from Plasmodium falciparum
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle