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View Structure Prediction Details

Protein: CE22786
Organism: Caenorhabditis elegans
Length: 254 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22786.

Description E-value Query
Range
Subject
Range
gi|187036605, gi... - gi|39585695|emb|CAE59897.1| Hypothetical protein CBG03381 [Caenorhabditis briggsae], gi|187036605|em...
gi|157756877 - gi|157756877|ref|XP_001670782.1| Hypothetical protein CBG03381 [Caenorhabditis briggsae AF16]
263.0 [0..1] [254..1]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVFVPVQTT AEIVLVDVTA AQKKAMKKLT CRKCEGHGTY AILKGHAGVC PYKDCSCGTC  60
   61 ASVMSMRANA LIRRFRHRQP DQSMAVVKAL RSKNGNMRLR IVPRNDEETV VENDGTLVTY 120
  121 SSDKNGHQTY TTTTRRSSIM TNSTDDRD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.05
Match: 1lpvA
Description: DM domain of Doublesex (dsx)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [149-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVVSTPPSTT NNSTPSGSPP LLVPYGDVDI AVDPVGAANW EQITNIVRTT MLNQILMNPT  60
   61 NVSPALISFL LQPTQQPSFE PSTMSLAPPV LFPTFLNGLS VPSLSV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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