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View Structure Prediction Details

Protein: rla-2
Organism: Caenorhabditis elegans
Length: 110 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rla-2.

Description E-value Query
Range
Subject
Range
gi|39582094, gi|... - gi|39582094|emb|CAE63737.1| Hypothetical protein CBG08266 [Caenorhabditis briggsae], gi|187032828|em...
gi|157747115 - gi|157747115|ref|XP_001668652.1| Hypothetical protein CBG08266 [Caenorhabditis briggsae AF16]
120.0 [0..1] [110..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYVSAYLLA VLGGNANPKV DDLKNILSAV GVDADAETAK LVVSRLAGKT VEELIAEGSA  60
   61 GLVSVSGGAA PAAAAAPAAG GAAPAADSKP AKKEEPKEES DDDMGFGLFD 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 31.619789
Match: PF00428.10
Description: No description for PF00428.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle