YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE22273
Organism: Caenorhabditis elegans
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22273.

Description E-value Query
Range
Subject
Range
gi|39593025, gi|... - gi|39593025|emb|CAE62639.1| Hypothetical protein CBG06772 [Caenorhabditis briggsae], gi|187034299|em...
144.0 [0..1] [181..1]
CE28945 - status:Confirmed UniProt:O44622 protein_id:AAK95883.1
133.0 [0..3] [181..2]

Back

Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLLTFLAT ILCVSELVST LQPECKLPLD MGKTPCKNGK KEIRYHFDQK SNIPLAFEYS  60
   61 GCGGNKNNFK TESECRFTCT GYDQSGCAAG SKPINDKNCQ TDEECGPKGI CRYSNHINIC 120
  121 CDKKIEKLIE ADYEPKCPKG KKVAKIVEGG IPTTIVGKSC KSKFCPAGAT CVEGTYFATC 180
  181 CN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.221849
Match: 1bikA
Description: X-RAY STRUCTURE OF BIKUNIN FROM THE HUMAN INTER-ALPHA-INHIBITOR COMPLEX
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle