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View Structure Prediction Details

Protein: wht-9
Organism: Caenorhabditis elegans
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wht-9.

Description E-value Query
Range
Subject
Range
gi|113726386, gi... - gi|150395538|ref|YP_001326005.1| spermidine/putrescine ABC transporter ATPase subunit [Sinorhizobium...
326.0 [0..95] [422..13]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNDILTPDD ALTEPAEQKT QSIRDDELLP DKTQPSTSKS KMKTAVENLK AEIVEDDINE  60
   61 AENRFLVDKT QQTISISQDF GVFEDIVKDS TVSKYC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 2hydA
Description: No description for 2hydA was found.

Predicted Domain #2
Region A:
Residues: [97-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRILTWKGIT VEEIKKKKDT LQGRILDKVN GRALAGELTF IMGSSGAGKT TLLNVLTGRN  60
   61 MDGLKIKGDV MMNGRSLSSS EMKQLSAYVQ QEDVFMSSQT VSEVLHFAVK MKSPERLSTQ 120
  121 KRASLVDQML TTFGLKTCEH TRIGSVKEKG ISRGEKKRLA FACEILTDPP ILFCDEPTSG 180
  181 LDSFMSHQGK VAYEGSTKDV EGFLVKLGSP VPELTSVSDH FIRVLSRSIA HAVVSICGDI 240
  241 TMSLMVAPLI SVPVMVFGGF LITVDAVPVY YLPLTYVSWY HYAFEAIMIA FFKDHGDIKG 300
  301 CDKPVITQFE CSNGLKFISD QDFKVEHFWL DFIAVGAILL FWKLFGLLAF VVRIRRTT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.30103
Match: 1g291
Description: Maltose transport protein MalK, C-terminal domain; Maltose transport protein MalK, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.470983068319171 bayes_pls_golite062009
hydrolase activity 0.0582794297634999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle