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View Structure Prediction Details

Protein: CE22222
Organism: Caenorhabditis elegans
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22222.

Description E-value Query
Range
Subject
Range
gi|91076034 - gi|91076034|ref|XP_972053.1| PREDICTED: similar to CG5809-PA [Tribolium castaneum]
335.0 [0..1] [436..1]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRSLWILLV FAISGSSTFY TAKDSVFELT DSNFDAKVLK SDRIWIVEFY APYCGHCKSL  60
   61 VPEYKKAAKL LKGIAEIGAI DATVHQKIPL KYSIKGYPTI KIFGATEKSK PIDYNGPRTA 120
  121 KGIADAVKKS IEKSLEQRLK GKSSEKSKKS DKKGKVVVLT DSNFDKLVLN SKEPWMVEFF 180
  181 APWCGHCQKL EPEWKKAAEE MGGRVKFGAL DATAHESIAQ KFGIRGFPTI KFFAPGTSSA 240
  241 SDAEDYQGGR TSTDLISYAE SKYDDFGAAP EVVEGTGKAV VETVCKDKQL CIFTFLPSIF 300
  301 DCQSKCRKQK IDMLNELATI FKKRSFGWVW MEGGAQENVQ RAFEIGDYGF PVLIAMSPKK 360
  361 MMYSTQIGQF SVDGIKEFLN AVNYGKGRVL EIKPTHLSNN FLKIVETQPW DGKDKELPVM 420
  421 EDIDLSDVDM DEKTEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.30103
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle