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View Structure Prediction Details

Protein: CE21267
Organism: Caenorhabditis elegans
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21267.

Description E-value Query
Range
Subject
Range
gi|20808521, gi|... - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase [Thermoanaerobacter tengcongensis MB4], gi|2...
gi|20808521 - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family [Thermoanaerobacte...
380.0 [0..11] [450..5]

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Predicted Domain #1
Region A:
Residues: [1-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRRFPTAAP ESSILGEHLK FPSGKIAQNR FLKAALTEML SIFDPSTPGA NGVPTQEIIN  60
   61 VYDKWGNGQF GVILTGNVQV SPVHLEAPGN AMIFKEGETP ARREAYKKWA NVTKQDGALA 120
  121 VVQLSHGGRQ TPITVNKTPF SASDVQLDKE VRFIGFGKPV PLTPEQIKTE VIERFVYAAK 180
  181 YAYETGFDGV QLHGAHGYLL AQFTSPTTNK RTDHYGGSVS NRQRIVLEIF DAIRKEIPAS 240
  241 TGFLIGLKTN SVEFQSEGTT VDDAIEMCRA YENIGFDFVE LSGGTYEQLA FQHLKESTKR 300
  301 REAFFLEFAE KIRPVFKNTV VYLTGGFRTV NAMVEAIKSG ATQGIGLGRP ITAEPDLPKK 360
  361 ILQKLAPSAV FDAIDQSEFV LSLLASNTQI EQMGRNSLKE ANNDVTYGLS DFSDEDTVKR 420
  421 FGKAVEEFAE LLKIQASRGV AIPNVITFEG VKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.522879
Match: 1ps9A
Description: The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity 2.36642953353273 bayes_pls_golite062009
catalytic activity 2.31793084876503 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 0.95357258623775 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle