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View Structure Prediction Details

Protein: CE21261
Organism: Caenorhabditis elegans
Length: 520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21261.

Description E-value Query
Range
Subject
Range
CE20573 - phosphate permease status:Confirmed UniProt:Q18697 protein_id:AAB03157.2
346.0 [0..39] [518..6]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISTHLAPPF QYYAPNPVAP PIPTLDEKYK PFPHYNLEVV QWSLIFGVCL ILGVGMGAND  60
   61 IADSFGTSVG TGILTVTQAF ILATVVEMMG SVASGFSGDG QQLQVVNTES YEDNPDELVI 120
  121 GQIAMLVGCA TWLMVATFYS MPVSAIHSLL GATIGFSLVL RGLDGIVWDR VGMVMAVWIL 180
  181 SPIVSAIFTL IT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [193-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FFLVDVAILR AKNPVKRGIF LLPGIYAIVV FSNVFLFLQD GSKVFRIDEI PFLYTVAASL  60
   61 IIAVLAGFLA LFVVGPIMQR KLKSKFTDEQ KFVTATLHGW LIRKKRTKKI SVFILKYSEK 120
  121 TEKLPRIASS LSYTFPIVPR GWLRRAVYWA FPP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [346-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNDDQKAVR LFSFLQILTA CFAGFAHGAN DISNCVGPVR DLVHMYNEGY REDNTKLNIT  60
   61 VYILLLTTLA VVMGIWTLGV RVIRTVGKFS KMNPATGFSV QFGAAITALV NNMYNIPESG 120
  121 THCLVGSIFG LGLVRSGPIL EWHTVKYVFV SWILTIPGSG LISAAVMYLL QAVLG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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