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View Structure Prediction Details

Protein: fbp-1
Organism: Caenorhabditis elegans
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbp-1.

Description E-value Query
Range
Subject
Range
F16P2_ORYCO - Fructose-1,6-bisphosphatase, cytosolic OS=Oryza coarctata PE=2 SV=1
503.0 [0..6] [341..4]

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Predicted Domain #1
Region A:
Residues: [1-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASETSQFGI ETDSITLQRY VLQEQRKHAD ASGELTALLT NMLVAIKAIA SATQKAGLAK  60
   61 LYGIAGATNV QGEEVKKLDV LSNELMINML KSSYTTCLLV SEENDELIEV EEQRRGKYIV 120
  121 TFDPLDGSSN IDCLVSIGTI FGIYKKRGDG PATVDDVLKP GKEMVAAGYA LYGSATMVVL 180
  181 STGDGVNGFT LDPSIGEFIL THPNMKCKEK GSIYSLNEGY AQTWSKGFAE YIRTRKYPEA 240
  241 GKKAMGQRYV GSMVADVHRT ILNGGIFLYP PTVSAPNGKL RLLYECNPMA YIIEQAGGLA 300
  301 TTGKERILDI QPTQIHQRAP IILGSKLDVE EALEYLAKYD N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 143.0
Match: 1yxiA
Description: R-State AMP Complex Reveals Initial Steps of the Quaternary Transition of Fructose-1,6-bisphosphatase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle