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View Structure Prediction Details

Protein: CE20962
Organism: Caenorhabditis elegans
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20962.

Description E-value Query
Range
Subject
Range
gi|73964955 - gi|73964955|ref|XP_540463.2| PREDICTED: similar to ubiquitin specific protease 36 [Canis familiaris]
191.0 [0..26] [325..75]

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Predicted Domain #1
Region A:
Residues: [1-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRDDDNIDH LMSKLDLFGS LELQKYLDGQ TNCQLESSNL ENTASPSDGE GEENSMEYSY  60
   61 SPRGLNLSTG IANNGSSCWL NCLIQIMFNT PGVEFSLHQF ATKPFLERMR DTKDGNRNKV 120
  121 ALMFLLRSVF TDLRFSAERA INITSIIKVV DQLSPHPVSN QQQDASEMLQ NIVIWLKDAV 180
  181 DAAVAFQRIH VRECHEDIRL MEQKLKIIKL QEDRFDRIFA SNMYEETLGL RVHIQKNSLR 240
  241 ESFEKFFFAN DAYSVDVVMV QIVRLAQDGR KLHDNFLFPG NLVTESSATK EKCYFKLTSV 300
  301 MVHRGECAQS GHFYCFTLSK WANVNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.522879
Match: 2gfoA
Description: No description for 2gfoA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle