| Protein: | CE20865 |
| Organism: | Caenorhabditis elegans |
| Length: | 740 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20865.
| Description | E-value | Query Range |
Subject Range |
|
|
343.0 | [0..39] | [732..847] |
|
Region A: Residues: [1-286] |
1 11 21 31 41 51
| | | | | |
1 MNKKKKVSLF GEDDAEEQQN GAGWEINKGY AQKYDNWRRL EEMQKIKDKY GDIDDDDSSS 60
61 ESEPEWTEGH EEAFLKTLGA LKSGDSSCFE NGKGFFKDVQ DAPSKPNNNP KKSKSEKSKK 120
121 KDEKMTIKDY ERKLVLEKGG QIDESDEEAE YNKTQQRGYY EEQEEIRKSL SAAINADDGA 180
181 DDDLLTERKK TSKEQEDEDE DFYQWMKSED GKADKKKAKE LKHLKKFWKD DKNMDESDKF 240
241 LRDYLLNKDY EPGENEENPT YEDIVALEED EKDLDSNRKY EHKFNF
|
| Detection Method: |  |
| Confidence: | 22.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [287-451] |
1 11 21 31 41 51
| | | | | |
1 RFEDPDQEFI KQYPRTVAES MRSEDSSRKD KRHEREERKK REKAEKKKEL AELKKMKRSE 60
61 IEQKLGKLQK AAGIHIPLTL DELNADFDPK EFDKKMQSIF NDEYYGVEEN IQENEDEKPI 120
121 FSDMEDSDYE DYDNLDVDEL KREEQEADDD DEEDEESVDD EDEQE
|
| Detection Method: | |
| Confidence: | 5.045757 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [452-589] |
1 11 21 31 41 51
| | | | | |
1 VPKSKKSAMK NGKFDMVAAA QKAMSKDKND SRRKSKRNAL KDALARKKPL FNPKEKTFEE 60
61 YFNEYYALDY EDIIGDTPTR FKYRDVESND FGLSTDEILE ADERQLNAWA SLKKVTAYRT 120
121 SQEEFFDRKA YQRKAEDV
|
| Detection Method: | |
| Confidence: | 62.200659 |
| Match: | PF05178.3 |
| Description: | No description for PF05178.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [590-740] |
1 11 21 31 41 51
| | | | | |
1 NKKKRILSID FGGKKSLKRK MEDEQMEKEM AEMNDQNDNT EEDAEKKKKK KKRGKKKVKL 60
61 TETENPEENM TEAIENEVEE VDKQEQLPVP QPEEPEAAHE APKEEKKKTR KRNKNKNNVI 120
121 AEKFGQGMTD SRVKAYGLNP SRLKKGLVYG Q
|
| Detection Method: | |
| Confidence: | 1.08 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
