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View Structure Prediction Details

Protein: unc-87
Organism: Caenorhabditis elegans
Length: 565 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-87.

Description E-value Query
Range
Subject
Range
unc-87 - status:Confirmed UniProt:P37806 protein_id:AAT68897.1
442.0 [0..23] [565..2]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFNNTTSA SSFQSASSRY LMSSSSSIGP PQQQSAKLFP EHFYPSGLSP RQSEALERLR  60
   61 PNTASRERNI PIQFTGKNPT TNSALEEYKP VPHVQVTSPK SSIVPNFVSE QRGLQPQPTS 120
  121 QAPTNYRQFV AAPRSPRGYG DYPEMTGKAS AAGDSEPVQI PIKTQTPITQ ARAQETKIPT 180
  181 IVSPHPVYYY DNQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [194-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQPIQQIREE QPNATMETKV TGQGQPKRVG RWTLAQLRQT DGIIPSQAGW NKGDSQKLMT  60
   61 NFGTPRNTNT RVKSENLQEI PEDIANRTHG EVRLQSGTNK YCSQRGMTGF GSGRDVCREG 120
  121 VRVAQNPADL AELPEEKIRM SEGIVRLQAG TNKYDSQKGM 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.09691
Match: 1wypA
Description: Solution structure of the CH domain of human Calponin 1
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [354-565]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGFGTGRRET TKMVDSKHPE YDHEKPDQSE IPLQSGTNKF ASQKGMTGFG TARRETTKMV  60
   61 DSNHPDYSHE CSIDQTTIPS QMGSNQYASQ KGMTGFGQPR WEVLDPSISW QNRKSQGMVR 120
  121 LQSGTNRFAS QAGMIGFGTC RNTTFEAEGG ELPYEAMKVS ETIIPSQAGW NKGDSQKKMT 180
  181 SFGAPRDVKG KHLKRIWELE YPEEAEISLD RL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.0
Match: 1wymA
Description: Solution structure of the CH domain of human transgelin-2
Matching Structure (courtesy of the PDB):

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