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View Structure Prediction Details

Protein: CE20476
Organism: Caenorhabditis elegans
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20476.

Description E-value Query
Range
Subject
Range
gi|91089229 - gi|91089229|ref|XP_968302.1| PREDICTED: similar to CG5304-PA [Tribolium castaneum]
293.0 [0..33] [471..574]

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Predicted Domain #1
Region A:
Residues: [1-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVTGDYEMV KVVGGGDSDI FETPQRKISN FVFWNQTRVF ILILSLTCMT LTQINSQIFT  60
   61 FTVICMDDLI VEQQTSNLTE PHWIEGTTEK SILFSATAIG ALVALIPSVP ILNSLGVRLT 120
  121 LSFCGLCSTL GTFFTPLAVT YSFYLVVFCR VLQGIGISVI LTVLGVIPSY WSPKTEYSTY 180
  181 LAILSCAWQF SNVIFMPISG ILCDSSFGWR SIYYVFGVAT GFFYFVFFMF YTDIPGIHKN 240
  241 VSEKELGQIV EGKPEHTVRE AVPYWKICTD RCVLSAWVSF LGGNLGFITL LLYGPTYLRE 300
  301 VLQFDVRSTG YINALPYALC AIYKFGAGKI SDRVTFASDK AIYTFWLFSS IIGLGIGYII 360
  361 MAWTSDRNVA FVAFAFAVVT SGLIIMACVK CLAMRCQQHC HFAVSAISFL SYCVQFISPL 420
  421 GVGILCPDNT PDQWSRLFII ITLIMIITNA PFPWLTTQQA ANYTKRKDPK AFEKC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.39794
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

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