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View Structure Prediction Details

Protein: CE20335
Organism: Caenorhabditis elegans
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20335.

Description E-value Query
Range
Subject
Range
gi|187024674, gi... - gi|39583030|emb|CAE71809.1| Hypothetical protein CBG18823 [Caenorhabditis briggsae], gi|187024674|em...
217.0 [0..1] [362..1]

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Predicted Domain #1
Region A:
Residues: [1-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSDDEIQE IEAKRQKMSQ EDSEVEIEIL DEPEQGKLKN SSMSDEQKLH EFAIITATDE  60
   61 AFAQSILQDV DWDLKKALDV FYGSEAFAEA RSAAVMGASS SMASSGAAVM TAEDLKGFEV 120
  121 SVMSWNIDGL DGRSLLTRMK AVAHIVKNVN PDILFLQEVV DRDLAPIDKL QSLYKIYYSN 180
  181 KGCQYYTAIL VSKMFDVEKH DVIHFQNSGM YRTLQILEGS IGGLKVFLLN THLESTREHR 240
  241 PQRCAQFGFC MDKVREIIAQ NPGALVFFGG DLNLRDEEVS RVPDGVKDAW EAAGSDNKTK 300
  301 FTWDTFKNDN KQGFHGAKMR FDRLYWSGPL DKVKFTLEGR QRIRSCLCFP SDHWAINATF 360
  361 FA

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Detection Method: PSI-BLAST
Confidence: 28.221849
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle