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View Structure Prediction Details

Protein: cnc-8
Organism: Caenorhabditis elegans
Length: 72 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cnc-8.

Description E-value Query
Range
Subject
Range
gi|187025936, gi... - gi|39585474|emb|CAE70557.1| Hypothetical protein CBG17204 [Caenorhabditis briggsae], gi|187025936|em...
gi|157768819 - gi|157768819|ref|XP_001676230.1| Hypothetical protein CBG17204 [Caenorhabditis briggsae AF16]
89.0 [0..1] [72..1]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLNVLLVFL ATIIGLASAQ WGYGRPYGGY GGYGGGYGGY GPRPWGPRPW GPRPTVIEKT  60
   61 VIIRNGPWAH KV

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle