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View Structure Prediction Details

Protein: CE19825
Organism: Caenorhabditis elegans
Length: 452 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19825.

Description E-value Query
Range
Subject
Range
gi|67536615, gi|... - gi|67542336|ref|ZP_00420273.1| General substrate transporter:Major facilitator superfamily [Burkhold...
195.0 [0..7] [426..277]

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Predicted Domain #1
Region A:
Residues: [1-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISTETTNV LRLSISIVIL FSAVLAHEFI MEPLIAALAT AGRGGIEHRD GYLALCLIYF  60
   61 FNTISCFFAP YVVSKLSGKW AMVAGMMTII IVHSSYFLPN RYFILIASSI GGFGATFIWV 120
  121 GQGQYIIENV SDENREKNTS IQWALYKMSL IIGGIFFFFY FQNEPIEAIA KNGQMEKFFM 180
  181 VFLACIVISI INTCFLPQSE MSRNRVSQPF FQTTKNCFKL LKTQRMISLA VFFFYTGLVR 240
  241 SFWISIYPFC IKFTSNLASN TTRILTIGMI VTGCGQVIGS IFVAIIGNKI RKFGQHVLIL 300
  301 GALILHVILF LMISLSFPND APLHHTDGNG PVFPLSVYLA MAISALLGFG DAILQTQIYS 360
  361 YIAKYYQRDS SSVFSIFRFS SKPLSWFFRF QTMLAANHNN RSRLFHWLEN SWNNRQINFQ 420
  421 LFYSLCYLRK FFEAKNGKMK TGFLRHFKDL IN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle