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View Structure Prediction Details

Protein: CE19692
Organism: Caenorhabditis elegans
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19692.

Description E-value Query
Range
Subject
Range
CE21354 - status:Partially_confirmed UniProt:Q9N2S5 protein_id:AAF60927.1
372.0 [0..6] [333..32]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHPLLLLLI VQASRCSDIK IIGNTGDASL ATWRDWAQCQ PGKYVHGVEE KYETPKFIIR  60
   61 KHPKKYRPTS AEDNSEEDNK SDQILSADGP WGSWSGNTTF CPRGEAIVGF AIMKHIFYGD 120
  121 DRGVVNIAWY QQSPYGVRHY VKDSFKFLLG RHAINKPSSW ENNLFCSPGY VACGFRVKIQ 180
  181 KAQGPGTDNI GLENLQLKCC DIWNCT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 1vmoA
Description: Vitelline membrane outer protein-I (VMO-I)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [207-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGYGFRHLGE WANEDEKNSK SETQHLTGYF RTIGSMKYVN DKEKSFVLSK FHESIDNSTI  60
   61 VEAINSIFPG NKYTSEQLKA MVTDSMLWNK SMPLKVKIPA RTEIRSAQLL LKCGQYQVGL 120
  121 NLTKSQSRHL PKYPRGPATP SFGDGPGATT WV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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