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View Structure Prediction Details

Protein: tag-218
Organism: Caenorhabditis elegans
Length: 648 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-218.

Description E-value Query
Range
Subject
Range
tag-218 - status:Partially_confirmed UniProt:Q965J0 protein_id:AAK71375.1
343.0 [0..1] [648..489]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTEKYVAR PAVGHLPLDD SWTPTSAEAI QDEPSPDEEE YKRQYTCRMV PNEGPLYQHY  60
   61 MLEAVAVADD EVKIPLEEVK EEPVELPAAV VHEVVALKPA TRRESSISSD SGRGADCSTT 120
  121 SASALTSNTS MRRDRLVGTS NFGSQRSLWC ELPEVRAAGL LEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDDECKLRQE AYFEVITSEA SYLRSLNVLI THFMASPQML GSKSALSVLS DSDRKHLFSN  60
   61 IFAVRDCSER LLCDLETRLE ENLILDDICD ILSDHFDKHF EVYIKYCSNQ VYQDRTLRRL 120
  121 KTENPGFLSA VQRLEENKQC QGLDMRSFLM LPMQRVTRYP LLLYAILDRI TTTDDRYKTA 180
  181 TDALTSSNRV VRDCNEGARR MERTEQLLDI DRRLIYKDAD LKRIPLVSNS RYLVKKGVLT 240
  241 QLVERRSSNI LQSRQKARTL HVFLFSDMIM ITKKKLNGTF VCKDYAARRF VDMQPIEPDN 300
  301 PKIPLGATSN LVGRPHLFLC TLMRNARDKQ TELLLSADSE TDRERWL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.522879
Match: 1ki1B
Description: GEF of intersectin
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [511-648]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAVRPPTSTN PEEKIYAEWD CPQALVVHAY QPSQADELQL NIGDSLNILR KMPDGWLYGE  60
   61 RAGDGLGGWF PSSYVQAIIN DHTRANNYRQ RLRIIQAASG WHGNASPSST RSGGMPLMDR 120
  121 LRRMSNPKTY FQSGTVGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1g83A
Description: Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn
Matching Structure (courtesy of the PDB):

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